PhD Diego Darriba López  

(AXU-DR)

Department Computer Engineering
Knowledgment area Computer Architecture and Technology
Research  Research group Grupo de Arquitectura de Ordenadores
Research lines Bioinformatics Phylogenetics High Performance Computing
Contacto UDC directory
Orcid id0000-0001-5482-3932 ResearcherIDR-2360-2016 Scopus37088309000

Teaching

Subjects taught

This section shows the teaching given in degrees, masters and other officers studies in last 6 years.

Subject and involved studies Total hours
Advanced Parallel Programming 10
Computer Structure 83
Concurrency and Parallelism 40
Fundamentals of Computers 37
Fundamentals of Computers 45
Subject and involved studies Total hours
Advanced Parallel Programming
Master in High Performance Computing
10
Computer Structure
Degree in Computer Engineering
Master's in Computer Engineering
75
Concurrency and Parallelism
Degree in Computer Engineering
80
Fundamentals of Computers
Degree in Computer Engineering
50
Subject and involved studies Total hours
Computer Structure
Degree in Computer Engineering
Master's in Computer Engineering
120
Concurrency and Parallelism
Degree in Computer Engineering
94
Fundamentals of Computers
Degree in Computer Engineering
25
Subject and involved studies Total hours
Computer Science Preliminaries
Degree in Computer Engineering
59.5
Subject and involved studies Total hours
Fundamentals of Computers
Degree in Computer Engineering
60

Defined tutoring by teacher for 2019/2020 academic course.

Faculty of Computer Science

Quarter Day Site
1st quarter Wednesday
12:00 a 14:00
D3.10 Área Científica
1st quarter Thursday
17:30 a 19:30
D3.10 Área Científica
2nd quarter Monday
17:30 a 19:30
D3.10 Área Científica
2nd quarter Tuesday
12:00 a 14:00
D3.10 Área Científica
2nd quarter Thursday
12:00 a 14:00
D3.10 Área Científica
2nd chance Monday
18:00 a 20:00
D3.10 Área Científica
2nd chance Wednesday
12:00 a 14:00
D3.10 Área Científica

EOG works and final master thesis directed

No available EOG works or final master thesis directed by current teacher since 2013 year.

Research results

Select merit type and year to query research merits.

NUEVOS DESAFIOS EN COMPUTACION DE ALTAS PRESTACIONES: DESDE ARQUITECTURAS HASTA APLICACIONES (II)

Funding entity Ministerio de Economía y Competitividad (MINECO)
Main researches Ramón Doallo Biempica, Juan Touriño Domínguez
Type Proyecto Programas Nacionales
Dates From 30/12/2016 to 29/12/2019

Red Gallega de Computación de Altas Prestaciones II

Funding entity Xunta de Galicia
Main researches Ramón Doallo Biempica
Type Proyecto Programas Autonomicos
Dates From 01/01/2010 to 31/12/2011

Resolving complex phylogeographic patterns in the Balkan Peninsula using closely related wall-lizard species as a model system

Authors Nikolaos Psonis, Aglaia Antoniou, Emmanouela Kamareta, Adam Leachée, Panayiota Kotsakiozi, Diego Darriba, Alexey Kozlov, Alexandros Stamatakis, Dimitris Poursanidis, Oleg Kukushkin, Daniel Jablonski, Jelka Crnobrnja¿Isailovi¿, Iulian Gherghel, Petros Lymberakisa, Nikos Poulakakis
Journal MOLECULAR PHYLOGENETICS AND EVOLUTION Vol. 125 (pages 100 to 115)
DOI https://doi.org/10.1016/j.ympev.2018.03.021

The State of Software for Evolutionary Biology

Authors Diego Darriba, Tomas Flouri, Alexandros Stamatakis
Journal MOLECULAR BIOLOGY AND EVOLUTION Vol. 35 Num. 5 (pages 1037 to 1046)
DOI https://doi.org/10.1093/molbev/msy014

Prediction of Missing Sequences and Branch Lengths in Phylogenetic Data

Authors Diego Darriba, Michael Weiss, Alexandros Stamatakis
Journal BIOINFORMATICS Vol. 32 Num. 9 (pages 1331 to 1337)
DOI https://doi.org/10.1093/bioinformatics/btv768

Does the Choice of Nucleotide Substitution Models Matter Topologically?

Authors Michael Hoff, Sebastian Orf, Benedikt Riehm, Diego Darriba, Alexandros Stamatakis
Journal BMC BIOINFORMATICS Vol. 17 Num. 1 (pages 1 to 13)
DOI https://doi.org/10.1186/s12859-016-0985-x

Adapting Reproducible Research Capabilities to Resilient Distributed Calculations

Authors Manuel Rodríguez-Pascual, Christos Kanellopoulos, Antonio Juan Rubio-Montero, Diego Darriba, Ognjen Prnjat, David Posada González, Rafael Mayo-García
Journal International Journal of Grid and High Performance Computing Vol. 8 Num. 1 (pages 58 to 69)
DOI https://doi.org/10.4018/ijghpc.2016010105

The Phylogenetic Likelihood Library

Authors Tomas Flouri, Fernando Izquierdo-Carrasco, Diego Darriba, LT Nguyen, Bui Quang Minh, Arndt von Haeseler, Alexandros Stamatakis
Journal SYSTEMATIC BIOLOGY Vol. 64 Num. 2 (pages 356 to 362)
DOI https://doi.org/10.1093/sysbio/syu084

jmodeltest.org: Selection of Nucleotide Substitution Models on the Cloud.

Authors Jose Manuel Santorum , Guillermo López Taboada, Diego Darriba, David Posada
Journal BIOINFORMATICS Vol. 30 Num. 9 (pages 1310 to 1311)
DOI https://doi.org/10.1093/bioinformatics/btu032

High-Performance Computing Selection of Models of DNA Substitution for Multicore Clusters.

Authors Diego Darriba, Guillermo López Taboada, Ramón Doallo, David Posada
Journal INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS Vol. 28 Num. 1 (pages 112 to 125)

jModelTest2: More Models, New Heuristics and Parallel Computing

Authors Diego Darriba, Guillermo López Taboada, Ramón Doallo, David Posada
Journal Nature Methods Vol. 9 Num. 8 (pages 772 to 772)

ProtTest 3: fast selection of best-fit models of protein evolution

Authors Diego Darriba López, Guillermo López Taboada, Ramón Doallo, David Posada
Journal BIOINFORMATICS Vol. 27 Num. 8 (pages 1164 to 1165)

A Fault Tolerant Workflow for Reproducible Research
Annual Global Online Conference on Information and Computer Technology (GOCICT 2014)
International

Authors Manuel Rodríguez-Pascual, Antonio Juan Rubio-Montero, Rafael Mayo-García, Christos Kanellopoulos, Ognjen Prnjat, Diego Darriba, David Posada González
Place Louisville (Estados Unidos)
DOI https://doi.org/10.1109/gocict.2014.10

Boosting the Performance of Bayesian Divergence Time Estimation with the Phylogenetic Likelihood Library
12th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2013)
International

Authors Diego Darriba, Andre Aberer, Tomas Flouri, Tracy Heath, Fernando Izquierdo-Carrasco, Alexandros Stamatakis
Place Boston (Estados Unidos)
DOI https://doi.org/10.1109/ipdpsw.2013.267